Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEAS--SYLASSQNSSHNNQSIDPQALRENLKE--SYLKAWYSPWLDAKVKSNKK----EVFWILKEMNKS---TGYGEDLKP-NAKAFNDELIKNMDIERYPSTKIKAVVVRNNDV-RAVPTNKPYYLSP------KGYPFDRFQNSLVFPGTPVLITPFNPDKTYPPLQSSFVYGWIKVSEL------------AYMRDKEIELLTK--------LKNYDMPI---KEKNPLYTDYGEFYPH----------------------------AKIGELFPLIPQIQNASQIP-PKKELKAYGFLKDAKGYAALQSVFLDEKDFFVFPKAFTSEIMAYFINTMLGQKYGWGGLLGNRDCSAFTRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYIIKNATPFGTLIYLKGHIMLYLG-ERNHQAIVAHSIWS-------------VQTQKHFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVHKTSSPLNAN |
| 2I3O Chain:D ((2-516)) | FR-----------------------SRPNALSQRSVIASSS-------ELASLAGRDILKRGGNIFDAALAVSALCVTQNNLCGLGGDLFALIRDENGQIDLNGSGQASRAVSIDYYESGLTKIPERGPYAAITVPGIAGSWDEIFRKFATDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQYRGWSSIFPNGSVPVAGEILKQPDLAESFRLSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTDLDEFRIYETSPNSQGITVIEWIRGESHGYDSRTWEAKIEDIFETEEAYDKRRKITDPSYNIAQH---DSANGKGLPKRDHNDIGDTTYFSISDSEGRSVSIIQSNYG--FGSGIVPKGTGFVLQNRGSYFT----LQRDHPNALPGKRTFHTLAA--CVEKEHDLYASLGSGGDIQPQVQQILEILKDNTDPQAILDKPRWTEPYTIYEAPGAVYVESEELYRNVSKQISGRKVVLRDVSQEFGTAQITTLIRGDVVVGAADPRG--DGIAIPYS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35638 for 3392 contacts (10.5/contact) +
2D Compatibility (PS) -41729 + (NN) 7524 + (LL) 3580
1D Compatibility (HY) -6000 + (ID) 4000
Total energy: -4987.0 ( -1.47 by residue)
QMean score : 0.115
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