Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFKKGVILDAKSVGLKALEVLKEVA-DFDFYEVTSPNQIVE--RSIEAEIMVLNKVVITQEVLSQLPKLKLICITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEYSQSDIFTHISDIKMGL-IKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSPKDKKEEYERLS-----LEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLALILETKDLYYAS---DVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENIQDFLASQK |
1WWK Chain:B ((4-282)) | ------MKVLVAAPLHEKAIQVLKDAGLEVIYEEYPDEDRLVELVKDVEA-IIVRSKPKVTRRVIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKE--------AMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTN--ALVKALKEGWIAGAGLDVFEEEPLPKDHPLT--KFDN-VVLTPHIGASTVEAQERAGVEVAEKVVKIL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166671 for 2015 contacts (-82.7/contact) +
2D Compatibility (PS) -29475 + (NN) -14532 + (LL) 1904
1D Compatibility (HY) -22000 + (ID) 5200
Total energy: -235974.0 ( -117.11 by residue)
QMean score : 0.594
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