Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMSYSELVEHVFELLNLEIPKNLLASALKRYENFDNPKNPAPIFALN-------ERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGNFGNALGAFYAKKMGLNIAKIKVVTNSN-DVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH----EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 1VE5 Chain:A ((19-306)) | -----------------------------------------------------------------------------------HRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALS---KA---LALE-NPKGLLAVSSGNHAQGVAYA-AQVLGVKALVVMPED---PYKKACARAY-GAE--VVDRGVTAKNREEVARALQEET---GY-----ALIHP--FDDPLVIAGQGTAGLELLAQAGRMG----VFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLE-APPRTRADGVRTL--SLGERTFPILRE-------------R---------------VDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHGARLPQTLALLLSGGNRDFSP----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109338 for 2530 contacts (-43.2/contact) +
2D Compatibility (PS) -29650 + (NN) -13638 + (LL) 14780
1D Compatibility (HY) 7200 + (ID) 2200
Total energy: -132846.0 ( -52.51 by residue)
QMean score : 0.308
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