Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRRLLLNLFCMVFLQACLKPMSDPKAEKVDSQVQCGFGSKDC---------
4GOF Chain:A ((1-52))
MKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLAL
General information:
TITO was launched using:
RESULT:
Template:
4GOF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12265 for 227 contacts (-54.0/contact) +
2D Compatibility (PS) -4461 + (NN) -2404 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -21130.0 ( -93.08 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_4GOF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GOF-query.scw
PDB file :
Tito_Scwrl_4GOF.pdb
: