Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MKKSVIVGAISLAMTSLLSAETP-----KQ----------EKAIKTSPTK--KGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGL---------SNQQYAINGFGFVV---------GYKHFFKKAPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKGSQSFMFGYGAGTDV---LFNPAIFNRENLHFGFF------------LGVAIGGTSW-----------------------GPTNYYFKDLAEEYRGSFHPSNFQVLVNGGIRLGTKHQGFEIG----------------------LKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF |
| 1O75 Chain:A ((7-414)) | ETSYGYATLSYADYWAGELGQSRDVLLADLDAGMFDAVSRATHGHGAFRQQFQYAVEVLGEKVLSKQETEDSRGRKKWEYETDPSVTKMVRASASFQDLGEDGEIKFEAVEGAVALADRASSFMVDSEEYKITNVKVHGMKFVPVAVPHELKGIAKEKFHFVEDSRVTENTNGLKTMLTE-DSFSARKVSSMESPHDLVVDTVGTGYHSRFGSDAEASVMLKRADGSELSHREFIDYVMNFNTVRYDYYGDDASYTNLMASYGTKHSADSWWKTGRVPRISCGINYGFDRFKGSGPGYYRLTLIANGYRDVVADVRFLPKYEGNIDIGLKGKVLTIGGADAETLMDAAVDVFADGQPKLVSDQAVSLGQNVLSADFTP-GTEYTVEVRFKEFGSVRAKVVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28783 for 1652 contacts (-17.4/contact) +
2D Compatibility (PS) -29838 + (NN) -716 + (LL) 248
1D Compatibility (HY) -8000 + (ID) 2850
Total energy: -69939.0 ( -42.34 by residue)
QMean score : 0.009
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