Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRILFFLAATTFLLRAETASATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVDLEKERVKNFNQYSETKMSKGDLSAFGAFFKGSLEDCVEQKICYYEHRNGKVSFVVNDREKFYKHVLKDLGTELSLP----LFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKTQNSSNPDLDPMTNANTLKETASKEPETSSKKEKKPKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK |
2C2J Chain:A ((42-95)) | -------------------------------------------------------------------------------------------------------------TEDLKKSVQALQNTLTELQALQLQTKQAHWNVSGTLWYTLHELLQDHYEGISKFADDVAERQLSVGASSDGRAITIVAASRLPEIPGGFLDDAQVIQFFTYQYETVGQRIHQRVGDVEKVDPTTANLLQEVEHIIEKYQWQMRAFLQNTPTDPNTGFDINNGKPVP-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C2J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9067 for 219 contacts (-41.4/contact) +
2D Compatibility (PS) -5049 + (NN) -1244 + (LL) 9536
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -7674.0 ( -35.04 by residue)
QMean score : 0.287
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