Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKELILKRIKEARAKHAIQGANPIYRNIIKVEFEDLVEEYKHFQVLNKAELIESAKENLEQAILKALENFQSKKVLHSTDLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASP-R--LLSLITLNCIILLKKESIVRNLSEGVQALKNQGQNGALPTNMLLIGGPSRTADIELKTVFGVHGPQKVAVILY
1O8B Chain:A ((74-127))
------------------------------------------------------------------------------------------------------------DSLGIYVDGAD-EINGHMQMI-KGGG-ALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGMEIL
General information:
TITO was launched using:
RESULT:
Template:
1O8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31573 for 261 contacts (-121.0/contact) +
2D Compatibility (PS) -5388 + (NN) -1622 + (LL) 10464
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -29569.0 ( -113.29 by residue)
QMean score : 0.103
(partial model without unconserved sides chains):
PDB file :
Tito_1O8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O8B-query.scw
PDB file :
Tito_Scwrl_1O8B.pdb
: