Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGLWLVISLVFVGFLWANESYVFNNSKGRLTEKSVAFIEGVSKELYLKTGVRFAIDMTDFEKNPIALANKKERQSYQEGFLKQLKPPFVVFFFYHDAQKIELVANPKDLLDTDKIFFEKIAPLLPTNAKEYTPQRISAMLINGYSVAVDALAEKYHVNITQNFSAPKGVTFVKVVIYILLLTLLGAFLGLYFFKKS |
1A8L Chain:? ((1-119)) | -----------------------------------------------------------------MGLISDADKKVIKEEFFSKMVNP-VKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRID--RAPATTITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDETKQAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54256 for 848 contacts (-64.0/contact) +
2D Compatibility (PS) -11984 + (NN) 3969 + (LL) 5024
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -61947.0 ( -73.05 by residue)
QMean score : 0.328
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