Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVRGIFEELGEDNFRMFEKNLIDELKTLKTPH--IISTGGGIVMHENLKGL---GTTFYLKMDFETLIKRLNQKEREKRPLLNNLTQA---KELFEKRQALYEKNASFIIDARGGLNNSLKQVLQFIA
2IYZ Chain:A ((6-149))
----VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVV---RAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGN--TVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRNPGAVVRHILSRLQ
General information:
TITO was launched using:
RESULT:
Template:
2IYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59707 for 1004 contacts (-59.5/contact) +
2D Compatibility (PS) -15050 + (NN) -9415 + (LL) 956
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -93616.0 ( -93.24 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_2IYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IYZ-query.scw
PDB file :
Tito_Scwrl_2IYZ.pdb
: