Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MAGRMELKNIISETLNEIEKMAKTIDDGFNTAQKTPSFFKTPSHLQNTPNSKNANTPLEPKNAAKIETQEKITEEKEEAKEIITEEIVQENPTQALIPNERVFLKGLLERTLVLFKG-----MQALEEKEALKRLDLVARFLQYQLSVLEKRLESLERENTE-- |
| 4J1V Chain:A ((9-180)) | LRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWAD---PIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKN-FMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4J1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 18918 for 1042 contacts (18.2/contact) +
2D Compatibility (PS) -16031 + (NN) -5012 + (LL) 260
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -8765.0 ( -8.41 by residue)
QMean score : 0.382
|
|
|