Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MVVTIERME-SRINRLSAKIDALLEQQKKVISLLETYLSVYSTPQEASNKLFKG-----ISQGMELA--PEIAQ---EDEEK------------RLYV-LQYLSHVDITKNKQDSQLKKDCLEFIQRFNIP----------------KPIIVTALYNLKGIKPTKKEVAKQLQ--KLYVWERRYQQGGIDALKDRRGRPLKKP- |
| 1AER Chain:A ((1-211)) | AFLGDGGDVSFSTRGTQNWTVERLLQAHRQLEERGYVFVGYHGTFLEAAQSIVFGGVRAAIWRGFYIAGDPALAYGYAQDQEPDARGRIRNGALLRVYVPRSSLPGFYRTSLTLAAPEAAGEVERLIGHPLPLRLDAITGPEEEGGRLETILGWPLAERTVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALPDYASQPGKPPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10974 for 1040 contacts (10.6/contact) +
2D Compatibility (PS) -16166 + (NN) 4526 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 1600
Total energy: -4666.0 ( -4.49 by residue)
QMean score : 0.215
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