Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIVHKGVKHSLHLMPSGVLYPKCKNIISSAVVVSVKDLCEEISAFED----LENRLFISDRAHVILPYHAKKDAFKEKSQNIGTTKKGIGPCYEDKMARSGIRMGDLLDDKI----LEEKLNAHFKAIEPFKKAYDLGENYEKDLMGYFKTYAPKICPFIKDTTSMLIEANQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASACVSTGLNPKAINEVIGITKAYSTRVGNGPFPSE--------DTTPMGDHLRTKGVEFGTTTKRPRRCGWLDLVALKYACALNGCTQLALMKLDVLDGIDAIKVCVAYERKGERLEAFP---SDLKDCTPIYQTFKGW-EKSVGVRKLDDLEPNAREYIRFIEKEVGVKIGLISTSPEREDTIFL |
| 3UE9 Chain:B ((19-446)) | ---VVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGH--------TILRLIPSGIMREGVACYIGNGVVLSPEALFKEIGELEEAGLSVRERLFISEATTLILPYHIAIDQAREAR--------GIGPAYEDKVGRRALRVQDLFDARTFADRLRENLDFHNFVLTQYLGGAAVDFQATLDTM---LGYADRLRPMVADVSRRLYEENHAGRNLLFEGAQGTLLDIDHGTYPFVTSSNCVAGAAAAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPSRQDQIGITLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKIDGEDADLLPRGAAEVARCEPVYETFGGWKESTVGINSWDALPANARAYLTRVQEVAGVPIDMVSTGPDRDETILL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198180 for 3364 contacts (-58.9/contact) +
2D Compatibility (PS) -41714 + (NN) -10507 + (LL) 1272
1D Compatibility (HY) -33600 + (ID) 9100
Total energy: -291829.0 ( -86.75 by residue)
QMean score : 0.518
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