Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIEK--PGKIVGGSIQFLGQDLLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEV-LKIHHPSLNKKERLERVVYELERVGIPHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEILIADEPTTALDVTIQAQILELMKELQQKKGTSILFITHDLGVVAQIADEVVVMYKGHVVEQASAKELFADPRHPYTKALLNAIPKPGKEYRKKRLETVDENVDYLSFQKELR
2OLK Chain:D ((24-262))
-MIDVHQLKKSF----GSLEVLKGINVHIREGEVVVVIGPSGSGKS-TFLRCLNLLEDFDEGEIIIDGIN------LKAKDTNLNK-VR-EEVGMVFQR--FNLFPHMTVLNNITLAPMKVRKWPREKAE--AKAMELLDKVGLK---DKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLAN-EGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131504 for 1925 contacts (-68.3/contact) +
2D Compatibility (PS) -26000 + (NN) -12714 + (LL) 2920
1D Compatibility (HY) -22000 + (ID) 4350
Total energy: -193648.0 ( -100.60 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2OLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLK-query.scw
PDB file :
Tito_Scwrl_2OLK.pdb
: