Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFEKWIGLTLLLSSLGYPCQKVSISFKQYENLIHIHQKGC--NNEVVCRTLISIALLESSLGLNNKREK-SLKDTSYSMFHITLNTAKKF------YPTYSKTLLKTKLLNDVGF-AIQLAKQILKENFDYYHQKHPNKSVYQLVEMAIGAYNGGMKHNPNGAYMKKFRCIYSQVRYNE |
2GV0 Chain:A ((12-103)) | ---------------------------------EFKRHGMDGYHGYSLGDWVCTAKHESNFNTAATNYNRGDQSTDYGILQINSRWWCNDGKTPKAKNAC--GIECSELLKADITAAVNCAKRIVRDPNGMGAWVAWTKYCKGKDVSQWIKGCKL------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24207 for 584 contacts (-41.5/contact) +
2D Compatibility (PS) -8318 + (NN) 1763 + (LL) 4432
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -29780.0 ( -50.99 by residue)
QMean score : 0.295
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