Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILRRVTEALEAYKNGEMLIVMDDEDRENEGDLVLAGIFSTPEKINFMATHARGLICVSLTKDLANKFELPPMVSVNDSNHETAFTVSIDAKEA-KTGISAFERHLTIELLCKDTTKPSDFVRPGHIFPLIAKDGGVLARTGHTEASVDLCKLAGLKPVSVICEIM-KEDGSMARRGDKFLSDFAIKHNLKTLYVSDLISYRLENESLLKMFCQEEREFLKHQTQCYTFLDHQQKNHYAFKFKGAKTHDLAPLVRFHPIKEDFDFLTTGAFEAFFKALEYLKREGGYLIFMNTHSEQNNIVKDFGIGALVLKNLGVKDFRLLSSCEDRQYKALSGFGLKLVETISL |
| 3MK5 Chain:A ((10-212)) | --LDSVERAVADIAAGKAVIVIDDED---EGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMY-----------TVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVS-DEGSMAHTDE--LRVFADEHGLALITIADLIEWRRKHE-------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136419 for 1580 contacts (-86.3/contact) +
2D Compatibility (PS) -20484 + (NN) -11378 + (LL) 11648
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -176583.0 ( -111.76 by residue)
QMean score : 0.526
|
|
|