Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKNDDFVIAKNQLGNIVPNSVGVIRAVNGKSAMVLFIGLNELKRVDFSELEAIDIYRTGKGYDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSSTEKKKMDEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSCNTGLGRFKDNPKFLEKVIEYLKKYEK |
| 2JNY Chain:A ((8-53)) | ----------------------------------------------------------------------------------------------------------------------------LEVLACPKDKGPLRY------LE------SEQ-LLVNERLNLAYRIDDGIPVLLIDEATEWTPNNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20844 for 255 contacts (-81.7/contact) +
2D Compatibility (PS) -4586 + (NN) -914 + (LL) 7424
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -20420.0 ( -80.08 by residue)
QMean score : 0.566
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