Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MLINAVIEKDENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSK----KNSVIAPIE-IAFA-----
3KWR Chain:A ((8-90))
EVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPPASDPQYWRLASTEFVVWITMADVQFGPGA
General information:
TITO was launched using:
RESULT:
Template:
3KWR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54414 for 467 contacts (-116.5/contact) +
2D Compatibility (PS) -8036 + (NN) -1585 + (LL) 0
1D Compatibility (HY) -400 + (ID) 450
Total energy: -64885.0 ( -138.94 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3KWR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KWR-query.scw
PDB file :
Tito_Scwrl_3KWR.pdb
: