Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKYNYGGKK--YAISNGFDPMFKFEHPQKSLFDTTPFK---------IAMVGRYSNEKNQSVLIKAVA-LSRYKQDIVLLLKGKGPDEKKIKLLAQKLGVKTEFGFVN-SHELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE--RSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 2IW1 Chain:A ((2-371)) | -IVAFCLYKYFPF-GGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPK-----AFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGL---DVYFAADVCYAEKVAQEK--------GFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG-LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154899 for 2929 contacts (-52.9/contact) +
2D Compatibility (PS) -39049 + (NN) -20412 + (LL) 2100
1D Compatibility (HY) -4800 + (ID) 2850
Total energy: -219910.0 ( -75.08 by residue)
QMean score : 0.305
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