Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASGLASALVEKRVKSLLP-YYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSK----TKKNLEPYLKDMALKRVIVGPYEHHSNEVSWRE----GLCEVVRIPLNE-HGLLDLEILEQTLKKTPNSLVSVSAASNVTGILTPLKEVSSLCKEY----------RAILALDLANFSAHANPKDC--EYQTGFYAPHKLLGGVGGCGLLGISKD-LIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGLDFIHKKENNLLRVLVYGLKDLPAINIYGNL---TASR-VGVVAFNIGGISPYDLARVLSYEYAIETRAGCSCAGPYG------HDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR |
| 3A9Z Chain:A ((18-429)) | -------------------------------RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSS-SYVAGRKAKDIINTARASLAKMIGGK-PQDIIFTSG-GTESNNLVIHSTVRCFHEQQTLQ------------TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR-PTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-PR-IGALYVRGVGKLTPLY-PMLFGGGQ---------------ERNFRPGTENTPMIAGLGKAADLVSE-NCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRG-YMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVD------VARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195859 for 3259 contacts (-60.1/contact) +
2D Compatibility (PS) -40211 + (NN) -21821 + (LL) 4300
1D Compatibility (HY) -6800 + (ID) 3250
Total energy: -263641.0 ( -80.90 by residue)
QMean score : 0.409
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