Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPKATA-LSDELKEALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHVNWHFVSQCYEWAKKEGLGSVDYYINELVHKKA
3TQJ Chain:B ((3-192))
-FELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPFEKEPLEEIIRKSDGGIFNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKD-NNGKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFWQVVNWDFVMKNFKS---------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107317 for 1510 contacts (-71.1/contact) +
2D Compatibility (PS) -19541 + (NN) -6344 + (LL) 1788
1D Compatibility (HY) -17200 + (ID) 4750
Total energy: -153364.0 ( -101.57 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3TQJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQJ-query.scw
PDB file :
Tito_Scwrl_3TQJ.pdb
: