Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHILVSGATSGFGLEIAKAFLQKNHVVFGTGRRQENLQKLQLAYPKRFIPLC--FDLQNKPETKRAIETIFSMTDRIDALINNAGLALGLNKAYECELDDWEVMIDTNIKGLLHLTRLILPSMIEHDQGTIINLGSIAGTYAYPGGNVYGASKAFVKQFSLNLRADLAGTNIRVSNVEPG-----LCGETEFSMVRFKGDKIKAQSVYENTLYLKPQDIANIVLWIYEQPSHVNINRIEIMPTSQTFAPLPTHKNP
3P19 Chain:B ((19-251))
---VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL--PN---TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLS---------------------GGV-LAADDVARAVLFAYQQPQNVCIREIALAPTKQ-----------
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127477 for 1704 contacts (-74.8/contact) +
2D Compatibility (PS) -22007 + (NN) -4256 + (LL) 2920
1D Compatibility (HY) -14800 + (ID) 3800
Total energy: -169420.0 ( -99.42 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: