Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKE-GELFKITTTSNTTYHAKFVVVAIGKMG-QPNRPTTYKIPVALS-KQVVFSIN--DCKENEKTLVIGGGNSAVEYAIALCKTTP-TTLNYRKKEFSRINEDNAKNLQEVLDNNTLKSKLGVDIESLEEDNTQIKVNF-----TDNTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKS--GASIATALNHGYDVAIEIAKRLQS |
| 3LZW Chain:A ((4-315)) | -DTKVYDITIIGGGPVGLFTAFYGGMRQAS-VKIIESLPQLGGQLSALYPEKYIY--D-------VAG---FPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTN-EETHYSKTVIITAGNGAFKPRKL-ELENAEQYEGKNLHYFVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-----HEHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIE-K-NSIVVKSTMET-NIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156358 for 2525 contacts (-61.9/contact) +
2D Compatibility (PS) -31463 + (NN) -2705 + (LL) 1124
1D Compatibility (HY) -14000 + (ID) 3200
Total energy: -206602.0 ( -81.82 by residue)
QMean score : 0.427
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