Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKTFLIALALTASLIGAENTKWDYKNKENGPHRWDKLHKDFEVCKSGKSQSPINIEHYYHTQDKADLQFKYAASKPKAVFFTHHTLKASFEPTNHINYRGHDYVLDNVHFHAPMEFLINNKTRPLSAHFVHKDAKGRLLVLAIGFEEGKENPNLDPILEGIQKKQNLKEVALDAFLPKSINYYHFNGSLTAPPCTEGVAWFVIEEPLEVSAKQLAEIKKRMKNSPNQRPVQPDYNTVIIKSSAETR
4XFW Chain:B ((1-226))
---------------------KWDYKNKENGPHRWDKLHKDFEVCKSGKSQSPINIEHYYHTQDKADLQFKYAASKPKAVFFTHHTLKASFEPTNHINYRGHDYVLDNVHFHAPMEFLINNKTRPLSAHFVHKDAKGRLLVLAIGFEEGKENPNLDPILEGIQKKQNFKEVALDAFLPKSINYYHFNGSLTAPPCTEGVAWFVVEEPLEVSAKQLAEIKKRMKNSPNQRPVQPDYNTVIIKRSAETR
General information:
TITO was launched using:
RESULT:
Template:
4XFW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100187 for 1827 contacts (-54.8/contact) +
2D Compatibility (PS) -24432 + (NN) -14026 + (LL) 2136
1D Compatibility (HY) -27600 + (ID) 11150
Total energy: -175259.0 ( -95.93 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_4XFW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XFW-query.scw
PDB file :
Tito_Scwrl_4XFW.pdb
: