Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKKKHKIPTLKYFLRSLKQIYRLITFKEKMIFFLLVLMAVFSSFVEVMSLTLLMPFITLASDPSRALDDKDWKMVYDFFHFSSPVRLMYFFSFCLVGIYLFRMFYGVFFTYLRGRFSNKKAYQIKQQLFLQHIKNNYLSHLN-HNLDSLR----DIINNKAEGMFMSFNAFLSLLTEITVIVFFYSTLI--LTNWKITLVF---TTILALQIFFIVKKVTVLIKKKGEMAAKSKAQTLKVFSKF-----FSNFK--ITKLKDNHEEAHKLFGENSRKAHDTE-----IIYST----------LQVVPRYSIE---TVGFSLLILAVAYILFKYGEARMVLPTISMYALALYRILPSVTGVISYYNEIAYNQLATNVVFKSLSKTIVEEDLVPLDFNEKITLQNISFAYKSKHPV--LKNFNLTIQKGQKIALIGHSGCGKSTLADIIMGLTYPKSGEIFIDNTLLTSENRRSWRKKIGYIPQNIYLFDGTVGDNIAFGS---AIDEKRLIKVCKMAHIYDFLCE--HEGLKTQVGEGGAKLSGGQKQRIGIARALYDNPEILVLDEATSALDNETESKIMDEIYQIAKNKTLIVIAHRLSTIERCEVIIDMSQHKDNLG |
| 4M1M Chain:B ((112-594)) | -----------------------------------------------------------------------------------------YYYTGIGAGVLIVAYIQVSFWCLAAGR----QIHKIRQKFF-HAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMA-----TFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGA-----FSVGQAS---PNIEAFANA--------RGAAYEVFKIIDNKPSIDSFSKSGHK--------PDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDE--IEKAVKEANAYDFIMKLPHQ-FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183511 for 2998 contacts (-61.2/contact) +
2D Compatibility (PS) -46546 + (NN) -13422 + (LL) 12860
1D Compatibility (HY) -30400 + (ID) 8100
Total energy: -269119.0 ( -89.77 by residue)
QMean score : 0.321
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