Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIVLLGALGVLANAEESAAFVGVNYQVSMIQNQT--KMVNDNGLQ------KPLIKFPPYAGPGFEVGYKQFFGKKK-----WFGMRYYGFFDYAHNRFGVMKKGIPVGESGFIYNSFSFGGN-------TLTERDSYQGQYYINLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAG--DSWATSISKEIGSYVKHHSNSSYS-------------PANFQFLWK-FGVRTHIAIHNSLELGI--KVPTITHRLFFITNEKGYTLQADVRRVYAFQISYLRDF---------------------- |
| 4IIK Chain:A ((1-314)) | -MRSIITQICNGVLHGQSYQSGSNDLDKGNSEIFASSLFVHLNEQGKEIKDSDDKIVIGYTK-DGMAFQIVVDGFYGCERQAVFSFIDNYVLPLIDNFSLDLTRYPDSKKVTES-LIHTIYSLRSKHAPLAEFTMSLCVTYQKDEQLFCAGFGIG-DTGIAIKRNEGTIEQLVCHTEVDGFKDAFDNYSSANIDLVIERNSVFNTKVMPGDELVGYTYVPPMLEMTEKEFEVEKRIVRHLNLDPGNFDDKDPLFSQLLQVVKSKQKQLVEQAKETGQIQRFG-DDFTVGRLVIPDQLLINQLRIHALS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59006 for 1699 contacts (-34.7/contact) +
2D Compatibility (PS) -24080 + (NN) 11297 + (LL) 480
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -82109.0 ( -48.33 by residue)
QMean score : 0.115
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