Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNT------PVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 3IB7 Chain:A ((173-236)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTD-VRAILAGHLHYSTNAT-FVGIPVSVA---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37512 for 354 contacts (-106.0/contact) +
2D Compatibility (PS) -6509 + (NN) -3416 + (LL) 17020
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -32167.0 ( -90.87 by residue)
QMean score : 0.379
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