Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLK-RLEEEKFQILDRIRERT--SKQNIPLTLSIGIGYKE---DDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET |
| 3ICL Chain:A ((28-162)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVR-DGDTVARIGGDKFTILLNGAKDTLNGALVAQKILDGLAQPFVFGAQQIVISVSIGIAVSPADGETMEQLLRNADTAMYHAKSRGKNNYQFFSP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ICL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72408 for 975 contacts (-74.3/contact) +
2D Compatibility (PS) -14316 + (NN) -8060 + (LL) 42516
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -58418.0 ( -59.92 by residue)
QMean score : 0.459
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