Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTASVFVAGKLLPETMEALSKWDVKAFSGEENITEAELINNVTEVDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEATAELTLGLILDVARRISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQAVAKRAAAFGMNIIYSGHQPKEAAKEWNAEFVSQKELLKRSDVVTIHAAYSPSLKHLLNETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEP-KIGEDFAKLDNVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY |
2CUK Chain:C ((32-310)) | --------------------------------LPKAELLKRVEGAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDG--LWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTP----KPLPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169944 for 2227 contacts (-76.3/contact) +
2D Compatibility (PS) -30569 + (NN) -14030 + (LL) 3068
1D Compatibility (HY) -27600 + (ID) 6400
Total energy: -245475.0 ( -110.23 by residue)
QMean score : 0.555
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