Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGRWMINALIGQHALFGMESLLETK-TAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYK-NINQAPIVKVTRILVEIIELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLS-KKPITISSHENLLDQVDSFQTGNGLLTR
1ZYB Chain:A ((44-232))
----------------HFIKHKAGETII---KSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNY----ASSYVAHTEVHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQ-------GEKTFKVKMDDLARCLDDTRLNISKTLNELQDNGLIELHRKEILIPDAQKLL---------------
General information:
TITO was launched using:
RESULT:
Template:
1ZYB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123196 for 1248 contacts (-98.7/contact) +
2D Compatibility (PS) -19307 + (NN) -1574 + (LL) 2072
1D Compatibility (HY) -6400 + (ID) 1950
Total energy: -150355.0 ( -120.48 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1ZYB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZYB-query.scw
PDB file :
Tito_Scwrl_1ZYB.pdb
: