Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIENDGLYVADAESHKELAKYFESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQMPGETPVAPAE
1A9X Chain:A ((1-142))
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPI-------------------HWEVVRKIIEKERPDAVLP--------TMGG-------------QTALNCALELERQGVLEEFGVTMIGAT---ADAIDKAE
General information:
TITO was launched using:
RESULT:
Template:
1A9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4025 for 1034 contacts (3.9/contact) +
2D Compatibility (PS) -13247 + (NN) -2633 + (LL) 2348
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -15257.0 ( -14.76 by residue)
QMean score : 0.163
(partial model without unconserved sides chains):
PDB file :
Tito_1A9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A9X-query.scw
PDB file :
Tito_Scwrl_1A9X.pdb
: