Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEETLLERGYRKYRGADVDIYFNTNVCEHSGNCVKGNVELFNLDRKPWIMPDNVSKEEAKRVIHTCPSGALQYIEK-------
1B34 Chain:B ((26-118))
TGPLSVLTQSVKNNTQVLINC--------RNNKKLLGRVKAF--DRHCNMVLENVKEMDRYISKMFLRGDSVIVVLRNPLIAGK
General information:
TITO was launched using:
RESULT:
Template:
1B34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12959 for 448 contacts (-28.9/contact) +
2D Compatibility (PS) -7006 + (NN) -2474 + (LL) 564
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -25475.0 ( -56.86 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1B34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B34-query.scw
PDB file :
Tito_Scwrl_1B34.pdb
: