Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEQEIIEKVEILPNNFSENDSIYISQENIKNLVLFSKENQTVLELLITPFLICVNSGL---KYELHYYEISTEISKNDTEIIGFPFGNKLPKEITDNISPKLFVR--REDYSAFENFLSQYFNAMKSMGFADDKQAIGMIEHGATLFYEVL
4TYZ Chain:A ((1-109))
NIEGVFRKSFPDLAGE---------TLLDSFNCAWVEGSALKQGYLFITPHWLCFQSTLAAAHFSIEYDEIKDIIKSKSVKM------FENAIEVKTHLNDTIFLTNFLQRDQAYSALMSQWLK----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4TYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9579 for 693 contacts (-13.8/contact) +
2D Compatibility (PS) -11132 + (NN) -59 + (LL) 2872
1D Compatibility (HY) -7600 + (ID) 950
Total energy: -26448.0 ( -38.16 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_4TYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TYZ-query.scw
PDB file :
Tito_Scwrl_4TYZ.pdb
: