Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MWVLMKNGIVDVEATNAYNAAVLGGKMPHESNEAQEEAELLQAVVQSVK--EGTDPVTGQEISKAQGFSIISGVIFYYA-GGGYKGKKIKIPKKWLDR-------RRNVNRIDFLQSVNIKDFVVKDK--HLRNSTAKRARKFDAETSEEANLIVQ-DALKNGKVKKIEDNGLGSQRQKSYSAIIDTEKNVGTKGESHIKIVYDELNNVWTV----YPVPAP----- |
| 4FYP Chain:A ((34-261)) | GLSINYPNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDD-TLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNGSKLTQVVYKSKVRNSLVKKGY----------NIVGNIGDQWADLVEDTPGRVFKLPNPLYYVPSLEHHHH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 59618 for 1438 contacts (41.5/contact) +
2D Compatibility (PS) -20446 + (NN) -4505 + (LL) 864
1D Compatibility (HY) -8000 + (ID) 1500
Total energy: 26031.0 ( 18.10 by residue)
QMean score : 0.141
|
|
|