Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYIDIANIGFKYESE--PVLENISFQVSAGEFIILTGENGAAKSTLLRIILGILQPDKGSVTFAKKNADGGRL---LTGYVPQQIASF---NAGFPSTVLELVRSGRFPNGKWFKRLTTKDHAHVEKALKSVEMWDY-------RHKRIGE----LSGGQKQRICLARMFATDPDILILDEPQTAMDKQSKIRFYNLLKHEAQVHGKAILMVTHDSEEMEDFVDKHIRLIRKEDVSWKCFSMDLCKEPSKRP |
| 2HYD Chain:B ((340-513)) | ---IDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLI-----PRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGR-P--------TATDEEVVEAA-KMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESE------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42021 for 1056 contacts (-39.8/contact) +
2D Compatibility (PS) -16522 + (NN) -9613 + (LL) 6544
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -76062.0 ( -72.03 by residue)
QMean score : 0.404
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