Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKERTTMMSNLKKFGLAFLSVILLVNVIFQTNFVKAATNYGSDFLKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLDFSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENVPVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWADAENPELIQWVVRVNYSKQ-NIQNAVYEDFIGPKQVVDFNSIKAFHGEFDPDDNFTPGAEVPSSAITQTTDGFKVDLGNL----------TDSVKISYYTTSTDN-GASPNYTNKGQLTGDNFIKQEIEVATPTSGGGGGGEGTTGSVELTKTDDSSQKNPL---EGAEFKLVNGAGATVQ-TGLKTNADGKLAISNLKYD-TYQLIETKAPQGYVLDASPVK----FTIDDTHQSL-F-VS-KENTAIKGSVSLEKVDRDTKSLLADAEFELQDKDGNT--L-------------------------------------------------------------------------KTNLKTDQKGKLTVADLLPGEYQFVETKAPTGYILDTTPLKFKISTEALNVTVTKENTKKPEIPKVPVPPKKPEKPDKIISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLIALRRK |
| 2Y1V Chain:A ((187-570)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVGDVVEYEIVTKIPALANYATANWSDRMTEGLAFNKGTVKVTVDDVALEA--------GDYALTEVATGFDLKLTDAGLAKVNDQNAEKTVKITYSATLNDKAIVEVPESNDVTFNYGNNPDHGNT-------PKPNKPNENGDLTLTKTWVDATGAPIPAGAEATFDLVNAQTGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVER-SIKGYSADYQEITTAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVND-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTAT------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 43503 for 2016 contacts (21.6/contact) +
2D Compatibility (PS) -29692 + (NN) -2932 + (LL) 14628
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: 9907.0 ( 4.91 by residue)
QMean score : 0.356
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