Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MFNKKKTIASLIVLSSLASQIALTPISALADTHDTNNIALLQNTNENVPYKYTSTLTFPTLTNQ-----TQEDYKLEIKL--ALPSG------MNYTDLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTSTGSLKPKDISA--PVVKAE----ETEITYSPGSDVTEE-----QFLTDIHASVTDNYDS--TISLTSNFTSAVNLAVS------GDYSVNVQAT-------DKAGNVSNTLNVTVHVSTPAPV---AGANITVNHLDSNGNKIAESDTLTGVVNSNYQSESKK-------------ITGYTLETTPTNATGTFTD------TPQTVDYIYKKDTVTPTPITVN---------PVEPVKPV---------------NPVVNKPVTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQSKSSTIFG-------ALLLLISAPLLLFKKK---------------------------------------------------------------- |
| 4XDN Chain:A ((24-640)) | GDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTLSVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHDLPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTSFHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLALEMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKELKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFCEFYKVWEQTLLKGAVVLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLAQSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNPIWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVNRFKLKKALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAMRGKDVALTNAKLEALVKQITS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 91675 for 2784 contacts (32.9/contact) +
2D Compatibility (PS) -40744 + (NN) 15333 + (LL) 0
1D Compatibility (HY) -19200 + (ID) 3600
Total energy: 43464.0 ( 15.61 by residue)
QMean score : 0.021
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