Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MITFDQLDTELQALE-N-PNTIKI------FRNHGCPDSL-DLYGL-KIGDLKKI-IRREKLTKNHELAVKLIESNNS-DLIYLGLLAINPNKITTEQ--IEKWNIAF-RETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLPEAETLLQRAKET----------------LQTETNRTRYSM----NGFIITCGIYKDDLHEKAMEAAKSV-GKVHVNLGN-----TACKVPDAISYIEKARNRTK------------------------------- |
| 1W9Y Chain:A ((2-305)) | ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLG---DQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5948 for 1380 contacts (4.3/contact) +
2D Compatibility (PS) -23106 + (NN) -3407 + (LL) 360
1D Compatibility (HY) -3200 + (ID) 1800
Total energy: -25205.0 ( -18.26 by residue)
QMean score : 0.240
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