Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKSKKTYKILDTSVI-IDGRIADILTTGFL---DGTVVIPLFVLAELQHIA-DSSDTLKRTRGRRGLDILNRIQKEDAIQVEMYEGDFEDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS |
| 1O4W Chain:A ((10-134)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------KVRCAVVDTNVLMYVYLNKADVVGQLREFGFSRFLITASVKRELEKLEMSLRG-KEKVAARFALKLLEHFEVVET------------ESEGDPSLIEAAEKYGCILITNDKELKRKAKQRGIPVGYLKEDKRVFVELL---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11314 for 820 contacts (-13.8/contact) +
2D Compatibility (PS) -12380 + (NN) 712 + (LL) 19248
1D Compatibility (HY) 2800 + (ID) 550
Total energy: -1484.0 ( -1.81 by residue)
QMean score : 0.244
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