Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------M-SKVL-EAKQSAVEEIKTKLSASASTVIV----------------DYRGLNVGEITDLRKQLRDAGIEFKVYKNSLTRRAVEANGYEGLEGALTGPNAIAFS-NEDVVAPAKILNDFAKD---HEALEIKAGVIEGKVASLEEIKALATLPSREGLLSMLCNVL---QAPVRGLAIATKAVADQKEGQEA---------------------------- |
4G3A Chain:A ((5-231)) | KPSDLDGFIQQMPKADMRVKVQLAEDLVTFLSDDTNSIVCTDMGFLIDGLMPWLTGSHFKIAQKSLEAFSELIKRLGSDFNAYTATVLPHVIDRLGDSRDTVREKAQLLLRDLMEHRVLPPQALIDKLATSCFKHKNAKVREEFLQTIVNALHEYGT--QQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHVGDRLRPDLRRMDDVPASKLAMLEQKFDQVKLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6427 for 1146 contacts (5.6/contact) +
2D Compatibility (PS) -17032 + (NN) -1282 + (LL) 320
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -19267.0 ( -16.81 by residue)
QMean score : 0.398
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