Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILG--------KQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQ----LLTIDDIKSL--REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKS-AEEIC---ALFDSVYVSFYKGIGGI---AGAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSA-DYYFE---KRIGKM-AEYFEAAKGLAERFNS-CSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL |
3B1D Chain:A ((46-388)) | -----------------------MPEVKQAIHDY---AEQLVYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTK-EG-EAVLINSPVYPPFA---RSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNP-GGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHE--VSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVM-KPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPK-----SLVEEICKRIVC-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150702 for 2554 contacts (-59.0/contact) +
2D Compatibility (PS) -34340 + (NN) -15824 + (LL) 1212
1D Compatibility (HY) -6400 + (ID) 2150
Total energy: -208204.0 ( -81.52 by residue)
QMean score : 0.487
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