Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRKSRWLLILLLLIVLVALSACEDSGNGDISGAPAKMEKQHFPPTDTKKGWIELLATDGISSQDNLPCVYEEAESVEKLEVHMKELSTASLTYIYIDGHIVQMEQGGDELSFQIQLSKTELRKGIHELAVVQYQENNPETKKVEFLKRANYEVKQIKND
2WAO Chain:A ((51-93))
---------------------------------------------------------------------------------------GENWFQAIVDGNPLPPFSVNA-TTSTVKL-VSGLAEGAHHLVLWK---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17520 for 195 contacts (-89.8/contact) +
2D Compatibility (PS) -4539 + (NN) 396 + (LL) 8148
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -15065.0 ( -77.26 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_2WAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WAO-query.scw
PDB file :
Tito_Scwrl_2WAO.pdb
: