Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNTPEALIDLFEELKNLFETDTSLNNQNSSRLQEILTTATIRVRKASQTVELEARSVFQNIHTLCFVEKIHLNPEEANVLKEIEKIALSKGFWGGMNTLNVTNQFPSN
2KTA Chain:A ((1-74))
MNQNLQGEWMKNYEELKSFVRKYRRFPKSTEGNLGGWCHTQRKMRKQGK------------------------LPNDRRLLLDKIG------------FVWSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7675 for 403 contacts (-19.0/contact) +
2D Compatibility (PS) -8277 + (NN) -7075 + (LL) 3204
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -25573.0 ( -63.46 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_2KTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KTA-query.scw
PDB file :
Tito_Scwrl_2KTA.pdb
: