Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFGHGNVVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQKNRKRIYACSASAGPGSANLITAASTALANNLPVLFLPADTFATRQPDPVLQQLEHESSAAITTNDGFQAVSRYFDRVQRPEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFF-QKRIHYLNRQIPTKRELTEAARLIQASKTPVIIVGGGARYSDAREELIALSEQSNIPLVETHAGKSTVEFDFKNNLGGTGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGPATKFININVSRMQTYKLD-A-FQVVGDAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREAFTPEIKDQFDQATLNEYADSLQTEFTQTEALITINDTVAPDSIVVCSAGSLPGDLQRLWNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSLQYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKVYRANTKEDLISALEDAKK---QTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQAYEEKQTNLKNARLY |
1V5E Chain:A ((2-541)) | -----NKINIGLAVMKILESWG----------ADTIYGIPSG-TLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVMQSKFGG--NLGVTVGSGGPGASHLINGLYDAAMDNIPVVAILGSRPQRELNMDAFQE--------LNQNPMYDHIAVYNRRVAYAEQLPKLVDEAARMAI--AKRGVAVLEVPGDFAKVEIDNDQWYSSANSLRKYAPIAPAAQDIDAAVELLNNSKRPVIYAGIGTMGH--GPAVQELARKIKAPVITTGKNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFPFSEVEGT--FRNVDNFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKVDAV-EESAWW-----TANLKNIANWREYI-------------------NMLETKEEGDLQFYQVYNAINNHADEDAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTYP-DRQVWNIIGDGAFSMTYPDVVTNVRYNMPVINVVFSNTEYAFIKNKYE----DTNK-NLFGVD--FTDVDYAKIAEAQGAKGFTVSRIEDMDRVMAEAVAANKAGHTVVIDCKITQDR--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229803 for 5012 contacts (-45.9/contact) +
2D Compatibility (PS) -58169 + (NN) -30253 + (LL) 6764
1D Compatibility (HY) -19600 + (ID) 6250
Total energy: -337311.0 ( -67.30 by residue)
QMean score : 0.422
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