Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGA----DLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQVEHENVINAAKKAG-VSYIAYTSFAGAD-K------STSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENE-MPMIGGALSAGKFVYAA-ENGKVGWALKREYAEVAAKAVAG-AGFPEI-LELSGPL-MTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQ---LDV-T--SDDFEKALGKPLTNRVDALRELLK |
| 2R6J Chain:A ((12-308)) | SKILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP--QILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKE--LPEPENIPIAILHCLFIDGATMSYDFKENDVEASTLYPELKFTTIDELLDIFVH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97999 for 2178 contacts (-45.0/contact) +
2D Compatibility (PS) -30202 + (NN) -18154 + (LL) -112
1D Compatibility (HY) -10000 + (ID) 2250
Total energy: -158717.0 ( -72.87 by residue)
QMean score : 0.516
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