Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGR---------------------VKIDGLNKDTNSEVIVHF-QNENLVAEKNGEPIAITPDLICMV--DLETLMPVTTEALKYGKRV---RVMALPADDAWRTD------KGIETVGPRYFGYDVDFEPLEELVKKEERRHV-------- |
| 4XD1 Chain:A ((21-417)) | MKLIIAGKNNIAVDVTKWIIKT-ISDIELYSVCNENDHGNDSF---QLSFKKFCIQFNIPIISLEDAYHLEDAIFLSLEFDKIIHPSKFTHNRIFNIHFSYLPAYKGMYT-SAWPILNNEQESGVTLHK--------IDHGIDTGAIIDQQKFPLDIEETAKTLYLKYIKIGTEIVIKNLPALISGNYSIVEQSAIKSS----YYSKKSIDYKNLMIDLNKT-AHEILQQIRAFTFRDYQ-----LPRIDDIDIFHGEILSSKSLSKPGTILEKNNYHLILSTIDYDIKLYSDNFDEILTACEDKSPEFISKLLKTENILFEKN--HLGASPIIIAAYHGNMDVIEWLVSKGVNINDRNYKGTTVAMYFKDYMLRSGNYTGLENLINLGLDLFLKDNEGLSVFDYMRKNKNIELFNFMSTFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XD1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55694 for 2427 contacts (-22.9/contact) +
2D Compatibility (PS) -35968 + (NN) -9898 + (LL) 1980
1D Compatibility (HY) -12800 + (ID) 2750
Total energy: -115130.0 ( -47.44 by residue)
QMean score : 0.167
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