Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKLVLSTL--SVAAMGMV---------------IFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNL-----------------------EPGKEVEVTLSSGLSADGEIELERVGATSDVITSSFKSNNSTVTMANPVIGSFSGYAIEETEVSKIQIGSPQGDKK--AGAYQTTLTFTAAFK |
4YZS Chain:A ((6-302)) | -SLVIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSSLKMIIPSLDGALFQWDRDRESMETVPFTVESLLESVVLVGGKSLTTYGLSAYSGKVRYICSALGCRQLLLQRTQKTVRAVGPRSGNEKWNFSVGHFELRYKVSVADWKVMEWEYQFCTPIASAWLLKDGKVIPISIVEAARGATENSVYLGMYRGQLYLQSS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16748 for 989 contacts (16.9/contact) +
2D Compatibility (PS) -16395 + (NN) 4154 + (LL) 404
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -1639.0 ( -1.66 by residue)
QMean score : 0.184
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