Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKGSFTKFKQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKRGWAIALLYLVIIGLLIL-LFSFVIPAVKDQIVS-LFKSFPGYWDQITQKFDEFSRSSLFDQLKDKLNTNMSDIMKTLST--KGTSVINSAISSIGSIVGTVTEVVLAIVTT---PLVLFYLLKDGKKLPDFLLKML-PVNGRAHTRQVLGEANHQISS-YIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSI-VPYLGPA-IAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKRISGLYGEQPESEYVETPTEEKEL |
4PX7 Chain:A ((1-258)) | -------------------------------------------------------------------------------GRSIARRTAVGAALLLVMPVAVWISGWRWQPGSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHMPVDKFYTLKRAERGNLVKEQLAEPQYLRSHWQKETGFAFPSGHTMF--------AASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHW--PRDLVVATLISWALVAVATW--LAQRICGPLTPPEENREIAQREQESLEHH----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202603 for 1691 contacts (-119.8/contact) +
2D Compatibility (PS) -24282 + (NN) -3700 + (LL) 14276
1D Compatibility (HY) 400 + (ID) 2200
Total energy: -218109.0 ( -128.98 by residue)
QMean score : 0.147
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