Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LILFYFLLIIGKFTFAYFQIFKDPNFLALGMDLLFIVLLLGLIHLFAPVRSHIYWYAGMSLFIGILMLVCVLYARFYNEVPTYHSFSLIGEVGVVKNSATSLLSGTDWLYILDIILLPFILYFNIKKGHEFPSFRLTSRVYGVSFISTLLILSGFTYFMMQQNIISDSKRAKRMGIFTFNISTALTGADHVKAADITAKNVNDIKGVSVKSNPDYFGAAKGKNLIIVQLE----SFQ-RNLTNV-KINGQSITPTLDGLQNETMYSNQF-FQTVSKSNTADAEWSVYTSTFPSGYYTNTQTYG-DRVIPSMPRLLGKNDYKTATF-----HTNDASFYNRDEFYPAVGFDKFYDRKFFG-DEDVIGFSPSDEVLYNKAFPILEEQYKNNQKFYAQLISVSSHMPFDIPKDKQEIDLPSDLKDTELGNYFEAVHYADKQLGEFIQKLKDSGIWDDSVVVFYGDHHIIKTDQLPEEQKKYVNRSTQLKAEPADDYRIPFFLHYPGMENPGEIKNVGGEIDIMPTVMNLLGIKTGDQIMFGTDILNSSNNYVPERYTMPEGSYFTNSYMYQPDESFETGAATNYDGTNKELSSDVKKRFDASRKLLQYSDSYVNNLPLRNEDK |
| 1O98 Chain:A ((230-510)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEFVLPSVIVREDGRPVATIQDNDAIIFYNFRPDRAIQISNTFTNEDF--REFDRGP--K-HPKHLFFVCLTHFSETVAGYV--AFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRIL-INSPKVPTYDLKPEMSAYEVTDALLKEIEA----DKYDAIILNYANPDMVGH---------------SGKLEPTIKAVEAVDECLGKVVDAILA----KGGIAIITADHGNADEVLT-----PDG-KP--QTA-HTT-NPVPVIVTKKGIK----LRDGGILGDLAPTMLDLLGLPQPK-EMTGKSLIV----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40610 for 1829 contacts (-22.2/contact) +
2D Compatibility (PS) -27967 + (NN) -5524 + (LL) 21976
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -58275.0 ( -31.86 by residue)
QMean score : 0.338
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