Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MLIPDN--LLQP-------VVG-----KKQVEPKESLAEE---------------LVELPFISLLMENSPAPLIKGEADNEEQATIPLKEIAPSLVSAKLLDSEPETK--LPSAPLELKEVKETLAAIAKQAIDQPKIDSAPQVAQPPEMNTPKEPTKNTT-REQQPPPELIMPT-----KDSPKLAENVAKNQP-----------ALAKL----PQEKEAVQLFKASIKE---------PVTAKEEVAVKKPAESSNIWHDTTKQLTPAAKV------------------EVPVTLKQLDKTITDQIEQLQKF-QVKQNKAFFAIQPE---SLGKVEVLLKKMPDKIFVHIEYQEQTAKQK---------------------------LEQMAQDLHNRFRDRGVEVAVTMTEKQAPKEN-GQGSEGRHHGESK------------KEKERENPHQEKAKQQVFDLEEET---------------------------------- |
| 5BP8 Chain:A ((6-520)) | APREAEAAALLAATVADPWGLVAPSVYDTARLVSLAPWLDGHRERLGYLAKEQNQDGSWGAPDGYGLVPTLSAVEALLTELARTDSGAPHLSPDDLAAACADGLGALRDGLLAGPVPDTIGVEFVAPSLLADINTRLAALTEQAPGKLGAWSGTTLTSPAPDLDGALLAGVREMTEQAPLPEKLWHTLEAVTRDGTRGARPHEGAPPHNGSVGCSPAATAAWLGAAPDPAAPGVAYLRDVQARFGGPVPSITPIVYFEQAWVLNSLAASGLRYEAPAALLDSLEAGLTDEGIAAAPGLPSDSDDTAAVLFALAQH--GRTHRPDSLMHFRRDGYFSCFGVERTPSTSTNAHILEALGHHVTVRPDDAGRYGAEIRMISDWLLDNQLPDGSWMDKWHASPYYATACCALALAEFGGPSARAAVDRAAAWALATQRADGSWGRWQGTTEETAYMVQLLMRTRTPGSPGTVARSAARGCDALLAHDDPASYPGLWHDKDIYAPVTVIRAARLAALALGGA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5BP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 155103 for 2294 contacts (67.6/contact) +
2D Compatibility (PS) -36638 + (NN) -23298 + (LL) 256
1D Compatibility (HY) 4400 + (ID) 2100
Total energy: 97723.0 ( 42.60 by residue)
QMean score : 0.166
|
|
|