Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKDNRKELIRAYKEKSPDAGVYRFISTKSGKSLIDNTMDLKGIANKLAFGVKIGAGNMLPPEMAKEAKEHGIDTIQFEILEKVDIK--PEMTKEDIKEENDVLLSLWLEREDI--
1S12 Chain:A ((1-94))
--------MIKVTVTNS------FFEVTGHAPD--------KTLCASVSLLTQHVANFLKAEKKAKIKKESGYLKVKFEELENCEVKVLAAMVRSLKELEQKFPSQIRVEVIDNGS
General information:
TITO was launched using:
RESULT:
Template:
1S12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 20904 for 597 contacts (35.0/contact) +
2D Compatibility (PS) -8991 + (NN) 3344 + (LL) 928
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 13185.0 ( 22.09 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1S12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S12-query.scw
PDB file :
Tito_Scwrl_1S12.pdb
: